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Contacts:
Laura L. Kiessling
Program Director
(608) 262-0541
kiessling@chem.wisc.edu

Sheila Graham
Program Coordinator
(608) 265-0654
smgraham2@wisc.edu

Address Information:
Room 471
Biochemistry Addition
433 Babcock Drive
Madison, WI 53706-1544
USA
Fax: (608) 265-0764
Department of Biochemistry

   
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CBIT STUDENT PUBLICATIONS


Name of Trainee
(Years in Program)
Mentor(s) Publication (Authors, Year, Title, Journal, PMCID)
McKay, Sonya L.
(1995-2001, PhD)
Gellman 1: McKay SL, Haptonstall B, Gellman SH.
Beyond the hydrophobic effect: attractions involving heteroaromatic rings in aqueous solution.


J Am Chem Soc. 2001 Feb 14;123(6):1244-5.


PMID: 11456685 [PubMed]





2: Gardner RR, McKay SL, Gellman SH.


Solvent-dependent stabilization of the E configuration of propargylic secondary


amides.


Org Lett. 2000 Jul 27;2(15):2335-8.


PMID: 10930277 [PubMed - indexed for MEDLINE]



Woycechowsky, Kenneth J.
(1995-2002, PhD)
Raines 1: Woycechowsky KJ, Hook BA, Raines RT.
Catalysis of protein folding by an immobilized small-molecule dithiol.


Biotechnol Prog. 2003 Jul-Aug;19(4):1307-14.


PMID: 12892495 [PubMed - indexed for MEDLINE]





2: Woycechowsky KJ, Raines RT.


The CXC motif: a functional mimic of protein disulfide isomerase.


Biochemistry. 2003 May 13;42(18):5387-94.


PMID: 12731880 [PubMed - indexed for MEDLINE]





3: Sweeney RY, Kelemen BR, Woycechowsky KJ, Raines RT.


A highly active immobilized ribonuclease.


Anal Biochem. 2000 Nov 15;286(2):312-4. No abstract available.


PMID: 11067760 [PubMed - indexed for MEDLINE]





4: Woycechowsky KJ, Raines RT.


Native disulfide bond formation in proteins.


Curr Opin Chem Biol. 2000 Oct;4(5):533-9. Review.


PMID: 11006541 [PubMed - indexed for MEDLINE]





5: Klink TA, Woycechowsky KJ, Taylor KM, Raines RT.


Contribution of disulfide bonds to the conformational stability and catalytic


activity of ribonuclease A.


Eur J Biochem. 2000 Jan;267(2):566-72.


PMID: 10632727 [PubMed - indexed for MEDLINE]





6: Woycechowsky KJ, Wittrup KD, Raines RT.


A small-molecule catalyst of protein folding in vitro and in vivo.


Chem Biol. 1999 Dec;6(12):871-9.


PMID: 10631515 [PubMed - indexed for MEDLINE]



Schuster, Michael C.
(1995-2000 for PhD; 1994-2002 for MD/PhD)
Kiessling 1: Schuster MC, Mann DA, Buchholz TJ, Johnson KM, Thomas WD, Kiessling LL.
Parallel synthesis of glycomimetic libraries: targeting a C-type lectin.


Org Lett. 2003 May 1;5(9):1407-10.


PMID: 12713285 [PubMed - indexed for MEDLINE]





2: Burke SD, Zhao Q, Schuster MC, Kiessling LL.


Synergistic formation of soluble lectin clusters by a templated multivalent saccharide ligand.


J Am Chem Soc. 2000 May 10;122(18):4518-4519





3: Schuster MC, Mortell KH, Hegeman AD, Kiessling LL


Neoglycopolymers produced by aqueous ring-opening metathesis polymerization: Decreasing saccharide density increases activity.


J Mol Catal A: Chem. 1997 Feb 24;116(1-2):209-216.



Carr, Heather S.
(1995-2000, PhD)
Burstyn 1: Carr HS, Tran D, Reynolds MF, Burstyn JN, Spiro TG.
Activation of soluble guanylyl cyclase by four-coordinate metalloporphyrins: evidence for a role for porphyrin conformation.


Biochemistry. 2002 Aug 6;41(31):10149-57.


PMID: 12146980 [PubMed - indexed for MEDLINE]





2: Serfass L, Carr HS, Aschenbrenner LM, Burstyn JN.


Calcium ion downregulates soluble guanylyl cyclase activity: evidence for a


two-metal ion catalytic mechanism.


Arch Biochem Biophys. 2001 Mar 1;387(1):47-56.


PMID: 11368183 [PubMed - indexed for MEDLINE]



Elder, Amy M.
(1995-2000, PhD)
Rich Elder AM, Rich DH.
Two syntheses of the 16- and 17-membered DEF ring systems of chloropeptin and complestatin.


Org Lett. 1999 Nov 4;1(9):1443-6.


PMID: 10825992 [PubMed - indexed for MEDLINE]



Strong, Laura E.
(1995-2000, PhD)
Kiessling 1: Kiessling LL, Gestwicki JE, Strong LE.
Synthetic multivalent ligands as probes of signal transduction.


Angew Chem Int Ed Engl. 2006 Apr 3;45(15):2348-68. Review.


PMID: 16557636 [PubMed - indexed for MEDLINE]





2: Gestwicki JE, Cairo CW, Strong LE, Oetjen KA, Kiessling LL.


Influencing receptor-ligand binding mechanisms with multivalent ligand


architecture.


J Am Chem Soc. 2002 Dec 18;124(50):14922-33.


PMID: 12475334 [PubMed - indexed for MEDLINE]





3: Lamanna AC, Gestwicki JE, Strong LE, Borchardt SL, Owen RM, Kiessling LL.


Conserved amplification of chemotactic responses through chemoreceptor


interactions.


J Bacteriol. 2002 Sep;184(18):4981-7.


PMID: 12193613 [PubMed - indexed for MEDLINE]





4: Gestwicki JE, Strong LE, Cairo CW, Boehm FJ, Kiessling LL.


Cell aggregation by scaffolded receptor clusters.


Chem Biol. 2002 Feb;9(2):163-9.


PMID: 11880031 [PubMed - indexed for MEDLINE]





5: Gestwicki JE, Strong LE, Borchardt SL, Cairo CW, Schnoes AM, Kiessling LL.


Designed potent multivalent chemoattractants for Escherichia coli.


Bioorg Med Chem. 2001 Sep;9(9):2387-93.


PMID: 11553480 [PubMed - indexed for MEDLINE]





6: Gestwicki JE, Strong LE, Kiessling LL.


Visualization of Single Multivalent Receptor-Ligand Complexes by Transmission


Electron Microscopy


Angew Chem Int Ed Engl. 2000 Dec 15;39(24):4567-4570. No abstract available.


PMID: 11169672 [PubMed - as supplied by publisher]





7: Kiessling LL, Gestwicki JE, Strong LE.


Synthetic multivalent ligands in the exploration of cell-surface interactions.


Curr Opin Chem Biol. 2000 Dec;4(6):696-703. Review.


PMID: 11102876 [PubMed - indexed for MEDLINE]





8: Gestwicki JE, Strong LE, Kiessling LL.


Tuning chemotactic responses with synthetic multivalent ligands.


Chem Biol. 2000 Aug;7(8):583-91.


PMID: 11048949 [PubMed - indexed for MEDLINE]





9: Gordon EJ, Gestwicki JE, Strong LE, Kiessling LL.


Synthesis of end-labeled multivalent ligands for exploring


cell-surface-receptor-ligand interactions.


Chem Biol. 2000 Jan;7(1):9-16.


PMID: 10662681 [PubMed - indexed for MEDLINE]





10: Gordon EJ, Strong LE, Kiessling LL.


Glycoprotein-inspired materials promote the proteolytic release of cell surface


L-selectin.


Bioorg Med Chem. 1998 Aug;6(8):1293-9.


PMID: 9784870 [PubMed - indexed for MEDLINE]





11: Kiessling LL, Strong LE, Gestwicki, JE.


Principles for multivalent ligand design.


Annu Rep in Med Chem. 2000;35:321-330.





12: Strong LE, Kiessling LL.


A general synthetic route to defined, biologically active multivalent arrays.


J Am Chem Soc. 1999 Jul 7;121(26):6193-6196.





13: Manning DD, Strong LE, Hu X, Beck PJ, Kiessling LL


Neoglycopolymer inhibitors of the selectins.


Tetrahedron 1997 Sep 1;53(35);11937-11952



Thiriot, David S.
(1995-2001, PhD)
Ruoho 1: Thiriot DS, Ruoho AE.
Mutagenesis and derivatization of human vesicle monoamine transporter 2 (VMAT2) cysteines identifies transporter domains involved in tetrabenazine binding and substrate transport.


J Biol Chem. 2001 Jul 20;276(29):27304-15. Epub 2001 May 24.


PMID: 11375404 [PubMed - indexed for MEDLINE]





2: Thiriot DS, Sievert MK, Ruoho AE.


Identification of human vesicle monoamine transporter (VMAT2) lumenal cysteines


that form an intramolecular disulfide bond.


Biochemistry. 2002 May 21;41(20):6346-53.


PMID: 12009896 [PubMed - indexed for MEDLINE]





3: Wu Z, Thiriot DS, Ruoho AE.


Tyr199 in transmembrane domain 5 of the beta2-adrenergic receptor interacts


directly with the pharmacophore of a unique fluorenone-based antagonist.


Biochem J. 2001 Mar 15;354(Pt 3):485-91.


PMID: 11237852 [PubMed - indexed for MEDLINE]





4: Rong Y, Arbabian M, Thiriot DS, Seibold A, Clark RB, Ruoho AE.


Probing the salmeterol binding site on the beta 2-adrenergic receptor using a


novel photoaffinity ligand, [(125)I]iodoazidosalmeterol.


Biochemistry. 1999 Aug 31;38(35):11278-86.


PMID: 10471277 [PubMed - indexed for MEDLINE]





5: Sievert MK, Thiriot DS, Edwards RH, Ruoho AE.


High-efficiency expression and characterization of the synaptic-vesicle monoamine


transporter from baculovirus-infected insect cells.


Biochem J. 1998 Mar 1;330 ( Pt 2):959-66.


PMID: 9480916 [PubMed - indexed for MEDLINE]



Tseng, Ta-Sheng A.
(1995-2002, PhD)
Burstyn Deck KM, Tseng TA, Burstyn JN.
Triisopropyltriazacyclononane copper(II): an efficient phosphodiester hydrolysis catalyst and DNA cleavage agent.


Inorg Chem. 2002 Feb 25;41(4):669-77.


PMID: 11849065 [PubMed - indexed for MEDLINE]



Harper, Laura A.
(1996-2001, PhD)
Vedejs Vedejs E, Daugulis O, Harper LA, MacKay JA, Powell DR.
A comparison of monocyclic and bicyclic phospholanes as acyl-transfer catalysts.


J Org Chem. 2003 Jun 27;68(13):5020-7.


PMID: 12816454 [PubMed]



Werner, Elizabeth A.
(1996-2001, PhD)
DeLuca 1: Werner EA, Deluca HF.
Retinoic acid is detected at relatively high levels in the CNS of adult rats.


Am J Physiol Endocrinol Metab. 2002 Mar;282(3):E672-8.


PMID: 11832372 [PubMed - indexed for MEDLINE]





2: Werner EA, DeLuca HF.


Metabolism of a physiological amount of all-trans-retinol in the vitamin


A-deficient rat.


Arch Biochem Biophys. 2001 Sep 15;393(2):262-70.


PMID: 11556813 [PubMed - indexed for MEDLINE]



Kremer, John J
(1997-2001, PhD)
R. Murphy 1: Kremer JJ, Murphy RM.
Kinetics of adsorption of beta-amyloid peptide Abeta(1-40) to lipid bilayers.


J Biochem Biophys Methods. 2003 Aug 29;57(2):159-69.


PMID: 12915007 [PubMed - indexed for MEDLINE]





2: Kremer JJ, Sklansky DJ, Murphy RM.


Profile of changes in lipid bilayer structure caused by beta-amyloid peptide.


Biochemistry. 2001 Jul 24;40(29):8563-71.


PMID: 11456496 [PubMed - indexed for MEDLINE]





3: Kremer JJ, Pallitto MM, Sklansky DJ, Murphy RM.


Correlation of beta-amyloid aggregate size and hydrophobicity with decreased


bilayer fluidity of model membranes.


Biochemistry. 2000 Aug 22;39(33):10309-18.


PMID: 10956020 [PubMed - indexed for MEDLINE]



Kelly, Wendy L.
(1997-1998, MS)
Lauhon None from Wisconsin; PhD with Townsend



Singer, Steven W.
(1997-2001, PhD)
Casey 1: Casey CP, Johnson JB, Singer SW, Cui Q.
Hydrogen elimination from a hydroxycyclopentadienyl ruthenium(II) hydride: study of hydrogen activation in a ligand-metal bifunctional hydrogenation catalyst.


J Am Chem Soc. 2005 Mar 9;127(9):3100-9. Erratum in: J Am Chem Soc. 2008 Jan


23;130(3):1110.


PMID: 15740149 [PubMed - indexed for MEDLINE]





2: Casey CP, Singer SW, Powell DR, Hayashi RK, Kavana M.


Hydrogen transfer to carbonyls and imines from a hydroxycyclopentadienyl


ruthenium hydride: evidence for concerted hydride and proton transfer.


J Am Chem Soc. 2001 Feb 14;123(6):1090-100.


PMID: 11456662 [PubMed - indexed for MEDLINE]





3: Casey CP, Johnson JB, Singer SW, Cui Q


Hydrogen elimination from a hydroxycyclopentadienyl ruthenium(II) hydride: Study of hydrogen activation in a ligand-metal bifunctional hydrogenation catalyst.


J Am Chem Soc. 2005;127(9): 3100-3109.





4: Casey CP, Vos TE, Singer SW, Guzei IA


Protonated aminocyclopentadienyl ruthenium hydride reduction of benzaldehyde and the conversion of the resulting ruthenium triflate to a ruthenium hydride with H-2 and base.


Organometallics. 2002;21(23):5038-5046.





5: Casey CP, Singer SW, Powell DR.


The role of a hydroxycyclopentadienyl ruthenium dicarbonyl formate in formic acid reductions of carbonyl compounds catalyzed by Shvo's diruthenium catalyst.


Can J Chem. 2001;79(5):1002-1011
Gelman, Michael A
(1998-2003 PhD Training; 1996-2005 for MD/PhD)
Gellmann 1: Gelman MA, Weisblum B, Lynn DM, Gellman SH.
Biocidal activity of polystyrenes that are cationic by virtue of protonation.


Org Lett. 2004 Feb 19;6(4):557-60.


PMID: 14961622 [PubMed - indexed for MEDLINE]





2: Gelman MA, Richter S, Cao H, Umezawa N, Gellman SH, Rana TM.


Selective binding of TAR RNA by a Tat-derived beta-peptide.


Org Lett. 2003 Oct 2;5(20):3563-5.


PMID: 14507173 [PubMed - indexed for MEDLINE]





3: Umezawa N, Gelman MA, Haigis MC, Raines RT, Gellman SH.


Translocation of a beta-peptide across cell membranes.


J Am Chem Soc. 2002 Jan 23;124(3):368-9.


PMID: 11792194 [PubMed - indexed for MEDLINE]



Jenkins, Cara L.
(1998-2001, PhD)
Raines 1: Jenkins CL, Vasbinder MM, Miller SJ, Raines RT.
Peptide bond isosteres: ester or (E)-alkene in the backbone of the collagen triple helix.


Org Lett. 2005 Jun 23;7(13):2619-22.


PMID: 15957905 [PubMed - indexed for MEDLINE]





2: Jenkins CL, Thiyagarajan N, Sweeney RY, Guy MP, Kelemen BR, Acharya KR, Raines


RT.


Binding of non-natural 3'-nucleotides to ribonuclease A.


FEBS J. 2005 Feb;272(3):744-55.


PMID: 15670155 [PubMed - indexed for MEDLINE]





3: Jenkins CL, Lin G, Duo J, Rapolu D, Guzei IA, Raines RT, Krow GR.


Substituted 2-azabicyclo[2.1.1]hexanes as constrained proline analogues:


implications for collagen stability.


J Org Chem. 2004 Dec 10;69(25):8565-73. Erratum in: J Org Chem. 2006 Feb


17;71(4):1754.


PMID: 15575731 [PubMed - indexed for MEDLINE]





4: Jenkins CL, McCloskey AI, Guzei IA, Eberhardt ES, Raines RT.


O-acylation of hydroxyproline residues: effect on peptide-bond isomerization and


collagen stability.


Biopolymers. 2005;80(1):1-8.


PMID: 15558658 [PubMed - indexed for MEDLINE]





5: Jenkins CL, Bretscher LE, Guzei IA, Raines RT.


Effect of 3-hydroxyproline residues on collagen stability.


J Am Chem Soc. 2003 May 28;125(21):6422-7.


PMID: 12785781 [PubMed - indexed for MEDLINE]





6: Jenkins CL, Raines RT.


Insights on the conformational stability of collagen.


Nat Prod Rep. 2002 Feb;19(1):49-59. Review.


PMID: 11902439 [PubMed - indexed for MEDLINE]





7: Jardine AM, Leonidas DD, Jenkins CL, Park C, Raines RT, Acharya KR, Shapiro R.


Cleavage of 3',5'-pyrophosphate-linked dinucleotides by ribonuclease A and


angiogenin.


Biochemistry. 2001 Aug 28;40(34):10262-72.


PMID: 11513604 [PubMed - indexed for MEDLINE]





8: Bretscher LE, Jenkins CL, Taylor KM, DeRider ML, Raines RT.


Conformational stability of collagen relies on a stereoelectronic effect.


J Am Chem Soc. 2001 Jan 31;123(4):777-8. No abstract available.


PMID: 11456609 [PubMed - indexed for MEDLINE]





9: Mannino SJ, Jenkins CL, Raines RT.


Chemical mechanism of DNA cleavage by the homing endonuclease I-PpoI.


Biochemistry. 1999 Dec 7;38(49):16178-86.


PMID: 10587440 [PubMed - indexed for MEDLINE]



Lambert, William T.
(1998-2003, PhD)
Burke 1: Lambert WT, Hanson GH, Benayoud F, Burke SD.
Halichondrin B: synthesis of the C1-C22 subunit.


J Org Chem. 2005 Nov 11;70(23):9382-98.


PMID: 16268612 [PubMed - indexed for MEDLINE]





2: Guzei IA, Clark RW, Burke SD, Lambert WT.


A comparison of the ring conformational properties of two derivatives prepared


from the same diene diacetate precursor.


Acta Crystallogr C. 2003 Dec;59(Pt 12):o721-3. Epub 2003 Nov 30.


PMID: 14671382 [PubMed - indexed for MEDLINE]





3: Lambert WT, Burke SD.


Halichondrin B: synthesis of a C1-C14 model via desymmetrization of


(+)-conduritol E.


Org Lett. 2003 Feb 20;5(4):515-8.


PMID: 12583757 [PubMed - indexed for MEDLINE]





4: Clark RW, Guzei IA, Ivanov SA, Burke SD, Lambert WT.


The lack of C2 molecular symmetry in


(1R,2R,3S,6S)-3,6-dibenzyloxycyclohex-4-ene-1,2-diol.


Acta Crystallogr C. 2001 Jul;57(Pt 7):844-5. Epub 2001 Jul 9.


PMID: 11443261 [PubMed - indexed for MEDLINE]





5: Burke SD, Jung KW, Lambert WT, Phillips JR, Klovning JJ.


Halichondrin B: synthesis of the C(1)-C(15) subunit.


J Org Chem. 2000 Jun 30;65(13):4070-87.


PMID: 10866625 [PubMed - indexed for MEDLINE]



Buege, Laura L.
(1999-2000 MS)
Mecozzi None.



Ciolli, Christopher J.
(1999-2004, PhD)
Belshaw 1: Levitsky K, Boersma MD, Ciolli CJ, Belshaw PJ.
Exo-mechanism proximity-accelerated alkylations: investigations of linkers, electrophiles and surface mutations in engineered cyclophilin-cyclosporin systems.


Chembiochem. 2005 May;6(5):890-9.


PMID: 15832403 [PubMed - indexed for MEDLINE]





2: Ciolli CJ, Kalagher S, Belshaw PJ.


TRAM linker: a safety-catch linker for the traceless release of acrylamides.


Org Lett. 2004 Jun 10;6(12):1891-4.


PMID: 15176776 [PubMed - indexed for MEDLINE]





3: Levitsky K, Ciolli CJ, Belshaw PJ.


Selective inhibition of engineered receptors via proximity-accelerated


alkylation.


Org Lett. 2003 Mar 6;5(5):693-6.


PMID: 12605492 [PubMed - indexed for MEDLINE]



Fix, Shannon R.
(1999-2001, MS)
Stahl 1: Fix SR, Brice JL, Stahl SS.
Efficient intramolecular oxidative amination of olefins through direct dioxygen-coupled palladium catalysis.


Angew Chem Int Ed Engl. 2002 Jan 4;41(1):164-6. No abstract available.


PMID: 12491473 [PubMed - indexed for MEDLINE]





2: Steinhoff BA, Fix SR, Stahl SS.


Mechanistic study of alcohol oxidation by the Pd(OAc)(2)/O(2)/DMSO catalyst


system and implications for the development of improved aerobic oxidation catalysts.


J Am Chem Soc. 2002 Feb 6;124(5):766-7.


PMID: 11817948 [PubMed - indexed for MEDLINE]



Odegard, Amy L.
(1999-2004, PhD)
Nibert 1: Nibert ML, Odegard AL, Agosto MA, Chandran K, Schiff LA.
Putative autocleavage of reovirus mu1 protein in concert with outer-capsid disassembly and activation for membrane permeabilization.


J Mol Biol. 2005 Jan 21;345(3):461-74.


PMID: 15581891 [PubMed - indexed for MEDLINE]





2: Odegard AL, Chandran K, Zhang X, Parker JS, Baker TS, Nibert ML.


Putative autocleavage of outer capsid protein micro1, allowing release of


myristoylated peptide micro1N during particle uncoating, is critical for cell


entry by reovirus.


J Virol. 2004 Aug;78(16):8732-45.


PMID: 15280481 [PubMed - indexed for MEDLINE]





3: Odegard AL, Chandran K, Liemann S, Harrison SC, Nibert ML.


Disulfide bonding among micro 1 trimers in mammalian reovirus outer capsid: a


late and reversible step in virion morphogenesis.


J Virol. 2003 May;77(9):5389-400.


PMID: 12692241 [PubMed - indexed for MEDLINE]



Zakrzewski, Laura L.
(1999-2001, MS)
Mecozzi None.



Sprague, Christopher L.
(1999-2004, PhD)
Elfarra 1: Sprague CL, Elfarra AA.
Protection of rats against 3-butene-1,2-diol-induced hepatotoxicity and hypoglycemia by N-acetyl-l-cysteine.


Toxicol Appl Pharmacol. 2005 Sep 15;207(3):266-74.


PMID: 16129119 [PubMed - indexed for MEDLINE]





2: Sprague CL, Elfarra AA.


Mercapturic acid urinary metabolites of 3-butene-1,2-diol as in vivo evidence for


the formation of hydroxymethylvinyl ketone in mice and rats.


Chem Res Toxicol. 2004 Jun;17(6):819-26.


PMID: 15206903 [PubMed - indexed for MEDLINE]





3: Sprague CL, Phillips LA, Young KM, Elfarra AA.


Species and tissue differences in the toxicity of 3-butene-1,2-diol in male


Sprague-Dawley rats and B6C3F1 mice.


Toxicol Sci. 2004 Jul;80(1):3-13. Epub 2004 May 5.


PMID: 15129020 [PubMed - indexed for MEDLINE]





4: Sprague CL, Elfarra AA.


Detection of carboxylic acids and inhibition of hippuric acid formation in rats


treated with 3-butene-1,2-diol, a major metabolite of 1,3-butadiene.


Drug Metab Dispos. 2003 Aug;31(8):986-92. Erratum in: Drug Metab Dispos. 2003 Sep


31(9):1198.


PMID: 12867486 [PubMed - indexed for MEDLINE]



Voight, Eric A.
(1999-2004, PhD)
Burke 1: Marvin CC, Voight EA, Burke SD.
Synthesis of (+)-didemniserinolipid B via ketalization/ring-closing metathesis.


Org Lett. 2007 Dec 20;9(26):5357-9. Epub 2007 Nov 30.


PMID: 18047361 [PubMed - indexed for MEDLINE]





2: Wysocki LM, Dodge MW, Voight EA, Burke SD.


Stereochemically general approach to adjacent bis(tetrahydrofuran) cores of


annonaceous acetogenins.


Org Lett. 2006 Nov 23;8(24):5637-40.


PMID: 17107091 [PubMed - indexed for MEDLINE]





3: Voight EA, Seradj H, Roethle PA, Burke SD.


Synthesis of the bryostatin 1 northern hemisphere (C1-C16) via desymmetrization


by ketalization/ring-closing metathesis.


Org Lett. 2004 Oct 28;6(22):4045-8.


PMID: 15496095 [PubMed - indexed for MEDLINE]





4: Voight EA, Roethle PA, Burke SD.


Concise formal synthesis of the bryostatin southern hemisphere (C17-C27).


J Org Chem. 2004 Jun 25;69(13):4534-7.


PMID: 15202915 [PubMed - indexed for MEDLINE]





5: Voight EA, Rein C, Burke SD.


Synthesis of sialic acids via desymmetrization by ring-closing metathesis.


J Org Chem. 2002 Nov 29;67(24):8489-99.


PMID: 12444630 [PubMed - indexed for MEDLINE]





6: Burke SD, Voight EA.


Formal synthesis of (+)-3-deoxy-D-glycero-D-galacto-2-nonulosonic acid (KDN) via


desymmetrization by ring-closing metathesis.


Org Lett. 2001 Jan 25;3(2):237-40.


PMID: 11430043 [PubMed - indexed for MEDLINE]



Erwin, Whitney M.
(2000-2006, PhD)
Lauhon Lauhon CT, Erwin WM, Ton GN.
Substrate specificity for 4-thiouridine modification in Escherichia coli.


J Biol Chem. 2004 May 28;279(22):23022-9. Epub 2004 Mar 22.


PMID: 15037613 [PubMed - indexed for MEDLINE]






Hinderaker, Matthew P.
(2000-2001, MS)
Raines 1: Arnold U, Hinderaker MP, Köditz J, Golbik R, Ulbrich-Hofmann R, Raines RT.
Protein prosthesis: a nonnatural residue accelerates folding and increases stability.


J Am Chem Soc. 2003 Jun 25;125(25):7500-1.


PMID: 12812474 [PubMed - indexed for MEDLINE]





2: Arnold U, Hinderaker MP, Raines RT.


Semisynthesis of ribonuclease A using intein-mediated protein ligation.


ScientificWorldJournal. 2002 Jun 28;2:1823-7.


PMID: 12806173 [PubMed - indexed for MEDLINE]





3: Hinderaker MP, Raines RT.


An electronic effect on protein structure.


Protein Sci. 2003 Jun;12(6):1188-94.


PMID: 12761389 [PubMed - indexed for MEDLINE]





4: Arnold U, Hinderaker MP, Nilsson BL, Huck BR, Gellman SH, Raines RT.


Protein prosthesis: a semisynthetic enzyme with a beta-peptide reverse turn.


J Am Chem Soc. 2002 Jul 24;124(29):8522-3.


PMID: 12121081 [PubMed - indexed for MEDLINE]



Cherney, Mellisa M.
(2001-2007, PhD)
Burstyn 1: Cherney MM, Pazicni S, Frank N, Marvin KA, Kraus JP, Burstyn JN.
Ferrous human cystathionine beta-synthase loses activity during enzyme assay due to a ligand switch process.


Biochemistry. 2007 Nov 13;46(45):13199-210. Epub 2007 Oct 23.


PMID: 17956124 [PubMed - indexed for MEDLINE]





2: Pazicni S, Cherney MM, Lukat-Rodgers GS, Oliveriusová J, Rodgers KR, Kraus JP,


Burstyn JN.


The heme of cystathionine beta-synthase likely undergoes a thermally induced redox-mediated ligand switch.


Biochemistry. 2005 Dec 27;44(51):16785-95.


PMID: 16363792 [PubMed - indexed for MEDLINE]





3: Clark RW, Youn H, Parks RB, Cherney MM, Roberts GP, Burstyn JN.


Investigation of the role of the N-terminal proline, the distal heme ligand in the CO sensor CooA.


Biochemistry. 2004 Nov 9;43(44):14149-60.


PMID: 15518565 [PubMed - indexed for MEDLINE]



Clare, Brian H.
(2001-2002 MS)
Gellman/Abbott 1: Clare BH, Guzman O, de Pablo JJ, Abbott NL.
Measurement of the azimuthal anchoring energy of liquid crystals in contact with oligo(ethylene glycol)-terminated self-assembled monolayers supported on obliquely deposited gold films.


Langmuir. 2006 May 9;22(10):4654-9.


PMID: 16649778 [PubMed - indexed for MEDLINE]





2: Clare BH, Abbott NL.


Orientations of nematic liquid crystals on surfaces presenting controlled


densities of peptides: amplification of protein-peptide binding events.


Langmuir. 2005 Jul 5;21(14):6451-61.


PMID: 15982053 [PubMed - indexed for MEDLINE]





3: Clare TL, Clare BH, Nichols BM, Abbott NL, Hamers RJ.


Functional monolayers for improved resistance to protein adsorption:


oligo(ethylene glycol)-modified silicon and diamond surfaces.


Langmuir. 2005 Jul 5;21(14):6344-55.


PMID: 15982041 [PubMed - indexed for MEDLINE]





4: Lasseter TL, Clare BH, Abbott NL, Hamers RJ.


Covalently modified silicon and diamond surfaces: resistance to nonspecific


protein adsorption and optimization for biosensing.


J Am Chem Soc. 2004 Aug 25;126(33):10220-1.


PMID: 15315415 [PubMed - indexed for MEDLINE]





5: Clare BH, Guzman O, de Pablo J, Abbott NL.


Anchoring energies of liquid crystals measured on surfaces presenting


oligopeptides.


Langmuir. 2006 Aug 29;22(18):7776-82.


PMID: 16922563 [PubMed - indexed for MEDLINE]



Miller, Reagan
(2001-2006 PhD)
Lee 1: Kim M, Miller RL, Lee D.
Cross and ring-closing metathesis of 1,3-diynes: metallotropic [1,3]-shift of ruthenium carbenes.


J Am Chem Soc. 2005 Sep 21;127(37):12818-9.


PMID: 16159273 [PubMed - indexed for MEDLINE]





2: Maifeld SV, Miller RL, Lee D.


Group-selective ring-closing enyne metathesis: concentration-dependent selectivity profile of alkynylsilyloxy-tethered dienynes.


J Am Chem Soc. 2004 Oct 6;126(39):12228-9.


PMID: 15453731 [PubMed - indexed for MEDLINE]





3: Miller RL, Maifeld SV, Lee D.


Ruthenium-catalyzed silyl ether formation and enyne metathesis sequence: synthesis of siloxacycles from terminal alkenyl alcohols and alkynylsilanes.


Org Lett. 2004 Aug 5;6(16):2773-6.


PMID: 15281766 [PubMed - indexed for MEDLINE]





4: Maifeld SV, Miller RL, Lee D.


Activation of silanes by Grubbs' carbene complex Cl-2(PCy3)(2)Ru=CHPh: dehydrogenative condensation of alcohols and hydrosilylation of carbonyls.


Tetrahedron Lett. 2002;43(36):6363-6366.



Scharon, Aracelis J.
(2001-2003 MS)

1: Kwon HJ, Smith WC, Scharon AJ, Hwang SH, Kurth MJ, Shen B.
C-O bond formation by polyketide synthases.


Science. 2002 Aug 23;297(5585):1327-30.


PMID: 12193782 [PubMed - indexed for MEDLINE]



Wolfe, Marcus
(2001-2002 MS)
Ludden 1: Wolfe MT, Heo J, Garavelli JS, Ludden PW.
Hydroxylamine reductase activity of the hybrid cluster protein from Escherichia coli.


J Bacteriol. 2002 Nov;184(21):5898-902.


PMID: 12374823 [PubMed - indexed for MEDLINE]





2: Heo J, Wolfe MT, Staples CR, Ludden PW.


Converting the NiFeS carbon monoxide dehydrogenase to a hydrogenase and a


hydroxylamine reductase.


J Bacteriol. 2002 Nov;184(21):5894-7.


PMID: 12374822 [PubMed - indexed for MEDLINE]



English, Emily (Payne)
(2002-2007 PhD)
Gellman 1: Chi Y, English EP, Pomerantz WC, Horne WS, Joyce LA, Alexander LR, Fleming WS, Hopkins EA, Gellman SH.
Practical synthesis of enantiomerically pure beta2-amino acids via proline-catalyzed diastereoselective aminomethylation of aldehydes.


J Am Chem Soc. 2007 May 9;129(18):6050-5. Epub 2007 Apr 17.


PMID: 17439122 [PubMed - indexed for MEDLINE]





2: English EP, Chumanov RS, Gellman SH, Compton T.


Rational development of beta-peptide inhibitors of human cytomegalovirus entry.


J Biol Chem. 2006 Feb 3;281(5):2661-7. Epub 2005 Nov 7.


PMID: 16275647 [PubMed - indexed for MEDLINE]





3: Peelen TJ, Chi Y, English EP, Gellman SH.


Synthesis of 4,4-disubstituted 2-aminocyclopentanecarboxylic acid derivatives and


their incorporation into 12-helical beta-peptides.


Org Lett. 2004 Nov 25;6(24):4411-4.


PMID: 15548038 [PubMed - indexed for MEDLINE]



Kolonko, Erin E. (McElroy)
(2002-2008 PhD)
Kiessling 1: Kolonko EM, Kiessling LL.
A polymeric domain that promotes cellular internalization.


J Am Chem Soc. 2008 Apr 30;130(17):5626-7. Epub 2008 Apr 8. No abstract.


PMID: 18393495 [PubMed - in process]





2: Borrok MJ, Kolonko EM, Kiessling LL.


Chemical probes of bacterial signal transduction reveal that repellents stabilize


and attractants destabilize the chemoreceptor array.


ACS Chem Biol. 2008 Feb 15;3(2):101-9.


PMID: 18278851 [PubMed - indexed for MEDLINE]



Johnson, Heather D.
(2002-2007 PhD)
Thorson None.



Kutz, Kimberly K. (Naber)
(2002-2006 PhD)
Li 1: Fu Q, Kutz KK, Schmidt JJ, Hsu YW, Messinger DI, Cain SD, de la Iglesia HO, Christie AE, Li L.
Hormone complement of the Cancer productus sinus gland and pericardial organ: an anatomical and mass spectrometric investigation.


J Comp Neurol. 2005 Dec 26;493(4):607-26.


PMID: 16304631 [PubMed - indexed for MEDLINE]





2: Yew JY, Kutz KK, Dikler S, Messinger L, Li L, Stretton AO.


Mass spectrometric map of neuropeptide expression in Ascaris suum.


J Comp Neurol. 2005 Aug 8;488(4):396-413.


PMID: 15973679 [PubMed - indexed for MEDLINE]





3: Kutz KK, Schmidt JJ, Li L.


In situ tissue analysis of neuropeptides by MALDI FTMS in-cell accumulation.


Anal Chem. 2004 Oct 1;76(19):5630-40.


PMID: 15456280 [PubMed - indexed for MEDLINE]





4: DeKeyser SS, Kutz-Naber KK, Schmidt JJ, Barrett-Wilt GA, Li L.


Imaging mass spectrometry of neuropeptides in decapod crustacean neuronal tissues.


J Proteome Res. 2007 May;6(5):1782-91. Epub 2007 Mar 24.


PMID: 17381149 [PubMed - indexed for MEDLINE]





5: Christie AE, Kutz-Naber KK, Stemmler EA, Klein A, Messinger DI, Goiney CC,


Conterato AJ, Bruns EA, Hsu YW, Li L, Dickinson PS.


Midgut epithelial endocrine cells are a rich source of the neuropeptides


APSGFLGMRamide (Cancer borealis tachykinin-related peptide Ia) and


GYRKPPFNGSIFamide (Gly1-SIFamide) in the crabs Cancer borealis, magister, and productus.


J Exp Biol. 2007 Feb;210(Pt 4):699-714.


PMID: 17267655 [PubMed - indexed for MEDLINE]





6: Ma M, Kutz-Naber KK, Li L.


Methyl esterification assisted MALDI FTMS characterization of the orcokinin


neuropeptide family.


Anal Chem. 2007 Jan 15;79(2):673-81.


PMID: 17222036 [PubMed - indexed for MEDLINE]





7: Saideman SR, Ma M, Kutz-Naber KK, Cook A, Torfs P, Schoofs L, Li L, Nusbaum


MP.


Modulation of rhythmic motor activity by pyrokinin peptides.


J Neurophysiol. 2007 Jan;97(1):579-95. Epub 2006 Oct 25.


PMID: 17065249 [PubMed - indexed for MEDLINE]





8: Cruz-Bermúdez ND, Fu Q, Kutz-Naber KK, Christie AE, Li L, Marder E.


Mass spectrometric characterization and physiological actions of GAHKNYLRFamide, a novel FMRFamide-like peptide from crabs of the genus Cancer.


J Neurochem. 2006 May;97(3):784-99. Epub 2006 Mar 3.


PMID: 16515542 [PubMed - indexed for MEDLINE]



Marvin, Christopher C.
(2002-2007 PhD)
Burke 1: Marvin CC, Voight EA, Burke SD.
Synthesis of (+)-didemniserinolipid B via ketalization/ring-closing metathesis.


Org Lett. 2007 Dec 20;9(26):5357-9. Epub 2007 Nov 30.


PMID: 18047361 [PubMed - indexed for MEDLINE]





2: Marvin CC, Clemens AJ, Burke SD.


Synthesis of thromboxane B2 via ketalization/ring-closing metathesis.


Org Lett. 2007 Dec 20;9(26):5353-6. Epub 2007 Nov 30.


PMID: 18047355 [PubMed - indexed for MEDLINE]



Restituyo, Jose
(2002-2006 PhD)
Rajski 1: Restituyo JA, Comstock LR, Petersen SG, Stringfellow T, Rajski SR.
Conversion of aryl azides to O-alkyl imidates via modified Staudinger ligation.


Org Lett. 2003 Nov 13;5(23):4357-60.


PMID: 14601999 [PubMed]





2: Mays JR, Restituyo JA, Katzenberger RJ, Wassarman DA, Rajski SR.


Cyclic disulfides as functional mimics of the histone deacetylase inhibitor FK-228.


Tetrahedron Lett. 2007 Jun 25;48(26):4579-4583.



Bennett, Stephanie L.
(2003 MS)
Kiessling None.



Mays, Jared R.
(2003-2007 PhD)
Rajski 1: Mays JR, Weller Roska RL, Sarfaraz S, Mukhtar H, Rajski SR.
Identification, synthesis, and enzymology of non-natural glucosinolate chemopreventive candidates.


Chembiochem. 2008 Mar 25;9(5):729-47.


PMID: 18327862 [PubMed - in process]





2: Mays JR, Restituyo JA, Katzenberger RJ, Wassarman DA, Rajski SR.


Cyclic disulfides as functional mimics of the histone deacetylase inhibitor FK-228.


Tetrahedron Lett. 2007 Jun 25;48(26):4579-4583.



Sanchez, Ramon O.
(2003-2004)
Burke None.



Wezeman, Rachel J.
(2005-2006 MS)
Blackwell 1: Geske GD, O'Neill JC, Miller DM, Wezeman RJ, Mattmann ME, Lin Q, Blackwell HE.
Comparative analyses of N-acylated homoserine lactones reveal unique structural features that dictate their ability to activate or inhibit quorum sensing.


Chembiochem. 2008 Feb 15;9(3):389-400.


PMID: 18224645 [PubMed - in process]





2: Geske GD, Wezeman RJ, Siegel AP, Blackwell HE.


Small molecule inhibitors of bacterial quorum sensing and biofilm formation.


J Am Chem Soc. 2005 Sep 21;127(37):12762-3.


PMID: 16159245 [PubMed - indexed for MEDLINE]
Poppe, Claire
(2006-2007 MS)
Furgeson None.

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