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Schedule

All talks at Ebling Symposium Center

Microbial Sciences Building
1550 Linden Drive

Thursday, July 30th, 2009

4:00 - 5:45 pm Reception and Registration
Pick up conference materials at Khorana Auditorium (Room 175 Biochemistry Addition, 433 Babcock Drive)
Time Speaker
Talk Title

Session 1: General

6:00 pm Aseem Ansari
UW-Madison
Welcome
6:05 - 6:20 Uttam RajBhandary
MIT
Comments
6:20 - 6:40 Marvin Caruthers
University of CO-Boulder
Nucleic Acid Chemistry: From Gobind to the Present
6:40 - 7:00
Peter Kim
Merck
Viral Membrane Fusion and its Inhibition
7:00 - 7:20 Henry Lardy
UW-Madison
The Metabolism and Function of Dehydroepiandrosterone
7:20 - 7:40 Marshall Nirenberg
National Institute of Health
Deciphering the Genetic Code
7:40 - 8:00 Marsha Rosner
University of Chicago
Regulation of Tumor Metastasis by MAP Kinase and MicroRNAs

Friday, July 31st, 2009

Time Speaker
Talk Title

Session 2: Nucleic Acids

8:30 am
Continental Breakfast
9:00 - 9:05
Chair: Hara Ghosh
Comments
9:05 - 9:25 Robert Wells
Texas A&M
Non-B DNA Conformations, Mutagenesis and Disease
9:25 - 9:45 Hikoya Hayatsu
Okayama University
Bisulfite Modification of Nucleotides: Mechanistic Consideration leading to improved Protocols of DNA Methylation Analysis
9:45 - 10:05 Sankar Adhya
National Cancer Institute
The Puzzle of Prophage λ Stability
10:05 - 10:25 Dieter Söll
Yale
The Genetic Code Revisited – Four Decades after Francis Crick
10:25 - 10:45 Coffee Break
10:45 - 10:50 Chair: Takao Sekiya
Comments
10:50 - 11:10 Li Niu
University at Albany
One RNA Aptamer Sequence, Two Structures: A Collaborating Pair that Competitively Inhibits AMPA Receptors
11:10 - 11:30 Hans-Joachim Fritz
Georg-August-Universitat
The Hopeful Cornucopia - A study into Combinatorial Gene Synthesis
11:30 - 11:50 Eiko Ohtsuka
AIST
Efficient Synthesis of Oligonucleotide Conjugates on Solid-Support Using an (Aminoethoxycarbonyl) aminohexyl Group for 5’-Terminal Modification
11:50 - 12:10 Simon Chang
LSU
The First Crystallographic Structure of Mammalian Phosphofructokinase from Rabbit Skeletal Muscle

12:10 - 1:45

Lunch and the Poster Session

Session 3: Membranes, Receptors and Signaling

1:45 - 1:50 Chair: Pere Garriga
Comments
1:50 - 2:10 Julius Adler
UW-Madison
Gobind Khorana and My Current Research on Drosophila Behavior
2:10 - 2:30 Marie-Alda Gilles-Gonzalez
UT Southwestern
Oxygen Control of Cyclic di-GMP Homeostasis
2:30 - 2:50 Wayne Hubbell
UCLA
Gobind Khorana and the “Central Dogma” of Receptor Activation
2:50 - 3:10 Thomas Sakmar
Rockefeller
Heptahelical Receptors: Ligand Recognition and Conformational Dynamics in Bilayers
3:10 - 3:30 David Farrens
Oregon Health & Science
Dynamics of G-Protein Coupled Receptor (GPCR) Activation and Attenuation: Insights from Fluorescence Studies
3:30 - 4:00 Break
4:00 - 4:05 Chair: Umesh Varshney Comments
4:05 - 4:25 John Hwa
Dartmouth
Pharmacogenetics of the Human Prostacyclin Receptor: “hIP, SNiP COX and Vioxx”
4:25 - 4:45 Kevin Ridge
University of Texas
Signaling via Structure Change: NMR Analysis of GPCR and G protein Activation
4:45 - 5:05 Judith Klein-Seetharaman
University of Pittsburgh
Learning from Rhodopsin about Metabotropic Glutamate Receptors
5:05 - 5:25 Peter Besmer
Sloan-Kettering
Oncogenic Kit Receptor Signaling and Targeted Molecular Therapies – in Mouse Models of Gastrointestinal Stromal Tumor

Saturday, August 1st, 2009

Time Speaker Talk Title

Session 4: Genes and Regulation

8:00 am
Continental Breakfast
8:25 - 8:30 Co-Chairs: Molly Jahn & Masayasu Nomura Comments
8:30 - 8:55 am Mark Ptashne
Sloan Kettering
Binding Reactions: Epigenetic Switches, Signal Transduction, Evolution and Cancer
8:55 - 9:20 Peter Dervan
Caltech
Transcription Factors as Targets for Cancer Therapy
9:20 - 9:45 Phillip Sharp
MIT
RNA as a Gene Regulation Modality
9:45 - 10:05 James Dahlberg
UW-Madison
Dissecting the roles of X. laevis miRNAs and Ago proteins in RISC activity
10:05 - 10:30 Ronald Breaker
Yale
Large Structured Non-coding RNAs Revealed by Bacterial Metagenome Analysis
10:30 - 10:45 Coffee Break

Session 5: Genomes, Networks, Systems and Molecular Medicine

10:45 - 10:50 Chair: Lloyd Smith Comments
10:50 - 11:15 Lee Hood
Systems Biology
Systems Biology, Transforming Technologies and the Emergence of P4 Medicine (Predictive, Personalized, Preventive and Participatory) 
11:15 - 11:40 Richard Young
Whitehead Institute MIT
Programming Cell State
11:40 - 12:05 Patrick Brown
Stanford
The "Dark Matter" of Biological Regulation?
12:05 - 12:25 Audrey Gasch
UW-Madison
Acquired Stress Resistance in Yeast: Multiple Means to the Same End

12:30 - 2:30

Lunch and the Poster Session (Continued)

Session 6: Rewiring Cell Fate and Signaling Pathways

2:30 - 2:35 Chair: Jennifer Reed Comments
2:35 - 2:55 James Thomson
UW-Madison
Human Induced Pluripotent Stem Cells Derived with Episomal Vectors
2:55 - 3:20 Wendell Lim
UCSF
Biological Innovation: The Evolution and Engineering of New Signaling Systems
3:20 - 3:40 Laura Kiessling
UW-Madison
Chemical Probes of Receptor Assembly in Signaling

Session 7: Rewiring Genes and Networks (Biofuels)

3:40 - 3:45 Chair: Tim Donohue Comments
3:45 - 4:10 Jay Keasling
Berkeley
Synthetic Biology for Synthetic Fuels
4:10 - 4:30 Robert Landick
UW-Madison
Genome-scale Chromosomal Engineering of Bacterial Hosts for Bioenergy Production
4:30 - 4:45 Break

Session 8A: Origins and Designing Life - Synthetic Life

4:45 - 4:50 Chair: Aseem Ansari
4:50 - 5:15 Hamilton Smith
J. Craig Venter Institute
Making a Synthetic Cell
5:15 - 5:40 George Church
Harvard Medical
Reading and Writing Genomes 
5:40 - 6:05 George Whitesides
Harvard
Questions about Questions about the Origin of Life
6:05 - 6:30 Alta Charo
UW-Madison
Synthetic Biology in Ethical Perspective
7:00 - 9:00 Banquet (Pyle Center - Alumni Lounge, 702 Langdon Street)

Violin Concerto - Ptashne with Adrian Levine & Sara Sitzer
Banquet speaker - William Dove

Sunday, August 2nd, 2009

Time Speaker Talk Title

Session 8B: Origins and Designing Life - Synthetic Genes and Genomes

8:00 am
Continental Breakfast
8:25 - 8:30 Chair: Nicole Perna Comments
8:30 - 8:50 am Fredrick Blattner
UW-Madison
Reducing the genome of E. coli: a top down approach to synthetic biology
8:50 - 9:15 Thomas Knight
MIT

9:15 - 9:40 Rob Phillips
Caltech
The Physics of Genome Management

Session 9: Nano-Devices and Biomachines

9:40 - 9:45 Co-Chairs: Franco Cerrina & George Phillips Comments
9:45 - 10:10 Nadrian Seeman
New York University
DNA: Not Merely the Secret of Life
10:10 - 10:35 William Shih
Harvard Medical
Programmable Self-assembly of DNA into Nanoscale Three-dimensional Shapes
10:35 - 10:55 Ryan Kershner
UW-Madison
Top Down Meets Bottom Up: Controlled Placement of DNA Nanostructures

Session 10: Development, Disease and Drug Design

10:55 - 11:00 Co-Chairs: James Ntambi & Hasan Mukhtar Comments
11:00 - 11:25 Michael Levine
Berkeley
Transcriptional Precision in the Drosophila Embryo
11:25 - 11:45 Alan Attie
UW-Madison
Gene Networks and Type 2 Diabetes
11:45 - 12:05 James Bradner
Dana-Farber Cancer Institute
Direct Inhibition of the Notch Transactivation Complex



12:05 - 12:25 Waclaw Szybalski
UW-Madison
Closing Remarks



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